Report on BUSTER refinement run in directory 1pmq_03_short

WARNING:
anisotropic ratio greater than 1; generally this implies serious data problems


Refinement vital statistics
initial final
Ncycles big 0 2
Ncycles small 0 21
X-ray weight n/a 4.55
Rwork 0.2213 0.2170
Rfree 0.2438 0.2444
100*(Rfree-Rwork) 2.2% 2.7%
LLGwork
(cumulative Log-Likelihood Gain, working set)
0 0.0114
LLGfree
(cumulative Log-Likelihood Gain, free set)
0 -0.0156
RMS bond in Å 0.0095 0.0088
RMS angle in degrees 0.99 0.98
High resolution limit in Å n/a 2.10
Low resolution limit in Å n/a 16.94
Number of waters 54 54
help? see BUSTER wiki Refinement vital statistics

Graph of R/Rfree against cycle of refinement

svg

reciprocal space correlation coefficient plots
start
svg
mtv svg agr png pdf
final
svg
mtv svg agr png pdf
help? see BUSTER wiki interpreting reciprocal-space CC plots

Run conditions
refine command /mnt/scratch_fs1/osmart/autobuster/Server/autoBUSTER/bin/linux64/refine -p 1pmq_02_refine.report-coot-0.pdb -m 1pmq/1pmq.mtz -d 1pmq_03_short -l 880.grade_PDB_ligand.cif -M ShortRunVoid -report
BUSTER version, run at, by user 2.13.0, Mon Jun 16 15:52:09 BST 2014, osmart
in directory /home/osmart/2014/06/erice_workshop/1pmq_tutorial
nthreads, hostname, OS 6, hypatia, Ubuntu precise (12.04.4 LTS)
buster-report command /home/osmart/autobuster/Server/scripts/buster-report -d 1pmq_03_short -dr 1pmq_03_short.report
buster-report version, run at, by user 1.1.4 <July 25 2015>, Sat Jul 25 18:59:29 2015, osmart
buster-report run on refine directory /home/osmart/2014/06/erice_workshop/1pmq_tutorial/1pmq_03_short
buster-report output directory /home/osmart/2014/06/erice_workshop/1pmq_tutorial/1pmq_03_short.report
final pdb coordinates 1pmq_03_short.report.pdb
final mtzfile 1pmq_03_short.report.mtz
this report pdf version report.pdf
this report tsv version report.tsv
this report xml version report.xml
help? see BUSTER wiki Run conditions table
Main X-ray Ligand analysis Geometry details Refinement progress Real-space correlation coefficients MolProbity analysis